Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1022441	1022505	65	39 [0]	[0] 31	yccS	predicted inner membrane protein

CTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAGG  >  W3110S.gb/1022379‑1022440                                                              | cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCTGTGAGCACCGAgg  <  1:1792941/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:424595/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2483589/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2541725/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2576139/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2606831/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2622273/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2645609/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2650704/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2698676/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:370048/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2306282/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:433708/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:51726/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:523801/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:692291/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:715265/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:862660/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:913665/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:95198/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2086595/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:1275559/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:1357246/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:150518/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:1771708/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:1796042/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:1821236/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:1877713/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2006702/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2378252/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2110619/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2134739/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2218398/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2234150/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2249482/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2256348/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:1216351/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCAAgg  <  1:1472590/62‑1 (MQ=255) cTGCGTCATCAAGAAACGCCAGAATTTCAGGATAAGTTAACTGCTCCCGGTGAGCACCGAgg  <  1:2214750/62‑1 (MQ=255)                                                              | CTGCGTCATCAAGAAACGCCAGAATTTCAGGATTAGTTAACTGCTCCCGGTGAGCACCGAGG  >  W3110S.gb/1022379‑1022440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑