Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1048333	1048346	14	28 [0]	[1] 32	ymcA	conserved hypothetical protein

ACGAACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATG  >  W3110S.gb/1048271‑1048332                                                              | acgaACCCATCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:660577/62‑1 (MQ=255) acgaACCCAGCGGATCCGTGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1456500/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1923429/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:926224/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:80433/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:530439/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:498516/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:317395/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:2897319/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:2837629/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:2461243/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:2186137/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:2097544/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1971056/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1018721/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1799562/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1735996/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1553842/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:143533/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1380683/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1341409/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:131051/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1249655/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1229212/62‑1 (MQ=255) acgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1093154/62‑1 (MQ=255)  cgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:2131445/61‑1 (MQ=255)  cgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1674672/61‑1 (MQ=255)  cgaACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATg  <  1:1557209/61‑1 (MQ=255)                                                              | ACGAACCCAGCGGATCCGGGTAGGTTAATACTTCAGCATGACAGGCACTGGAGACGGCAATG  >  W3110S.gb/1048271‑1048332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑