Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1191674	1191720	47	30 [0]	[0] 11	phoP	DNA‑binding response regulator in two‑component regulatory system with PhoQ

CGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTACG  >  W3110S.gb/1191612‑1191673                                                              | cGAGAGATATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:802008/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGTGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:2402962/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTCTTAcg  <  1:1212030/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1084382/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:850983/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:811966/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:74926/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:730782/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:510007/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:359124/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:2588545/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:2535974/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:2351944/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:2165160/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:2011666/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1991061/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:15947/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:150122/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1435478/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1275351/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1258775/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1178854/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1156597/62‑1 (MQ=255) cGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1121369/62‑1 (MQ=255) cGAGAGAGATCAACCTCAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:43771/62‑1 (MQ=255)  gagagagaTCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:969062/61‑1 (MQ=255)             aCCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:2467449/50‑1 (MQ=255)               cTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:2377211/48‑1 (MQ=255)                          ggAGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1078043/37‑1 (MQ=255)                            aGCGAAATGACCTGTGAAGCCAGACCGCTATTAcg  <  1:1766402/35‑1 (MQ=255)                                                              | CGAGAGAGATCAACCTGAAACGGGGGGAGCGAAATGACCTGTGAAGCCAGACCGCTATTACG  >  W3110S.gb/1191612‑1191673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑