Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1245439	1245447	9	7 [0]	[0] 26	ycgR	protein involved in flagellar function

GCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTG  >  W3110S.gb/1245378‑1245438                                                             | gcACTTTGTCTGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTg  <  1:199/61‑1 (MQ=255) gcACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTg  <  1:2353427/61‑1 (MQ=255) gcACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTg  <  1:2406915/61‑1 (MQ=255) gcACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTg  <  1:2737885/61‑1 (MQ=255) gcACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTg  <  1:2878196/61‑1 (MQ=255) gcACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTg  <  1:566640/61‑1 (MQ=255) gcACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTg  <  1:634863/61‑1 (MQ=255)                                                             | GCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTG  >  W3110S.gb/1245378‑1245438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑