Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1254154	1254207	54	33 [0]	[0] 11	dhaR	predicted DNA‑binding transcriptional regulator, dihydroxyacetone

GCATGCATTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGGC  >  W3110S.gb/1254097‑1254153                                                         | gcatgcatTTGAAATTACCATCCCGCCTGTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1711886/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:417702/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:2855948/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:2868486/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:295667/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:342987/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:371226/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:380146/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:383079/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:230760/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:717611/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:757722/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:839149/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:83956/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:87220/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:925472/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:929933/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:2678044/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1009999/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:225708/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:2087069/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:2058387/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1951604/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1884427/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1816514/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1366900/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1349198/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:132927/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1260572/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1226212/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1196201/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1096350/57‑1 (MQ=255) gcatgcatTTGAAATTACCATCCCACCTCTGCGTATGCGGCGTGGCAGCATTCCGgc  <  1:1064000/57‑1 (MQ=255)                                                         | GCATGCATTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGGC  >  W3110S.gb/1254097‑1254153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑