Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1541007	1541013	7	79 [0]	[1] 10	narZ	nitrate reductase 2 (NRZ), alpha subunit

CTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAGG  >  W3110S.gb/1540946‑1541006                                                             | cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGGATTAGCAGGTTTTCACTGTAgg  <  1:514422/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2765103/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:326822/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:322879/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2902278/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:2889533/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2889026/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2876767/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:2843494/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:282266/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:419865/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:2713586/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2636970/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2622230/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2611891/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:2596955/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2550958/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2540625/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2458197/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1017677/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:620061/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:999771/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:986365/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:973151/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:96623/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:931625/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:88166/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:786235/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:75624/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:651980/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:396760/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:604062/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:570405/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:562360/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:554254/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:53246/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:523864/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:518496/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2417369/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1355029/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:2390165/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1522164/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1517274/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1512861/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1477308/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1445879/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1445383/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1439628/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1358816/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1561723/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1287323/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1233097/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1230142/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1217894/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1178833/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1164886/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1073568/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:106468/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:105740/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1987023/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2338804/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2214689/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:2146647/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2123379/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2117107/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:2091061/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1589231/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1903800/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:187328/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1841064/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1837428/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1788098/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:1751700/1‑61 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1703842/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:1639920/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTAACTGTAgg  <  1:2144891/61‑1 (MQ=255) cTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGCTTTCACTGTAgg  >  1:213615/1‑61 (MQ=255) cTGATCCAGACAATCGGTCAACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  >  1:2523840/1‑61 (MQ=255)                ggTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAgg  <  1:457269/46‑1 (MQ=255)                                                             | CTGATCCAGACAATCGGTCCACCGCGAGAGAGCGTCAGCATTAGCAGGTTTTCACTGTAGG  >  W3110S.gb/1540946‑1541006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑