Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1852112	1852169	58	27 [0]	[0] 32	sppA	protease IV

AAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGA  >  W3110S.gb/1852170‑1852231 |                                                              aaaaGTGAAACAGTGGCATCTTGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1341948/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:571943/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2475353/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:258198/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2637087/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2663151/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:272064/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2737270/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2916343/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:410127/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2412692/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:614469/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:66077/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:713421/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:812372/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:845608/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:991480/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1022134/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2362525/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2265802/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2230332/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2063919/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2056721/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:2041032/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1697956/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1640808/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1514444/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1396086/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1371146/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1288602/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1147624/62‑1 (MQ=255) aaaaGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGa  <  1:1118119/62‑1 (MQ=255) |                                                              AAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGA  >  W3110S.gb/1852170‑1852231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑