Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1965785	1966001	217	14 [0]	[1] 16	flhA	predicted flagellar export pore protein

CAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATG  >  W3110S.gb/1965991‑1966063            |                                                              cAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTccgccg             <  1:2639747/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:1110906/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:123893/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:1273398/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:158843/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:1732317/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:1812897/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:2193228/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:220841/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:2652005/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:2734793/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:2823454/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:507327/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:638463/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:845590/62‑1 (MQ=255)            tttGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATg  <  1:956595/62‑1 (MQ=255)            |                                                              CAGCGCCGGAATTTGTGCCACCAGACCGTCGCCAATGGTCAATAGCGTATAACTTTCCGCCGCGTGTCCCATG  >  W3110S.gb/1965991‑1966063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑