Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1969222	1969263	42	28 [0]	[0] 60	cheB	fused chemotaxis regulator and protein‑glutamate methylesterase in two‑component regulatory system with CheA

CCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCCCCC  >  W3110S.gb/1969264‑1969325 |                                                              ccTCGCGCGGCATGCCGCACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2168691/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAggg             >  1:647610/1‑51 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGt            >  1:2046774/1‑52 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGt            >  1:5890/1‑52 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:2882753/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:2087438/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:2103908/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:2109842/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:232911/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:1006167/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:2500880/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:2710916/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:2836940/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:2412814/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:469845/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:489836/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:52320/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:548632/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:553024/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:60091/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:656386/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:905045/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:1719519/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:1767363/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:1282434/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:1627615/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:1762695/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTc           >  1:1329895/1‑53 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCCTGccccc  >  1:42719/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1346466/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:317848/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:368188/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1623570/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1607533/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:541654/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1502369/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1859936/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1294154/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1192592/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:666802/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:738414/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:755893/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1634882/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1918796/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1845211/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2184285/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2208399/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:221882/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1764325/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2422053/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2454824/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2465800/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2562895/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2573041/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2629134/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:1751190/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:2759485/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGccccc  >  1:290622/1‑62 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGcccc   >  1:1758878/1‑61 (MQ=255) ccTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGCGTc           >  1:1086351/1‑53 (MQ=255) |                                                              CCTCGCGCGGCATGCCGAACACCACGCAACTTGCTTCGTTTTGCGCAAGGGTCCATGCCCCC  >  W3110S.gb/1969264‑1969325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑