Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2014882	2014910	29	2 [0]	[0] 22	intG fliE	ECK1934:JW5913:b1936; predicted defective phage integrase flagellar basal‑body component

AAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGA  >  W3110S.gb/2014911‑2014972 |                                                              aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:2462634/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:914339/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:698006/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:580527/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:50160/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:440467/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:348837/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:313706/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:2919727/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:2823398/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:1045598/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:2236615/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:2226314/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:2079314/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:2060903/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:1784908/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:1542684/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:1541289/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:1312352/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgaga  >  1:1082642/1‑62 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgag   >  1:146537/1‑61 (MQ=255) aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCgag   >  1:852965/1‑61 (MQ=255) |                                                              AAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGA  >  W3110S.gb/2014911‑2014972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑