Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2317793	2317833	41	11 [0]	[0] 17	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

CAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCA  >  W3110S.gb/2317834‑2317886 |                                                     cAGAAAACGTCCCCAGCACGGCGGTCAATGACGAATTGCGCATTTTACGGGca  <  1:765273/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:2153275/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:962710/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:856635/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:355884/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:2915820/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:2280205/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:2257529/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:1177824/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:1852075/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:1840266/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:1704844/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:1549001/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:1477328/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:1413196/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGca  <  1:1399268/53‑1 (MQ=255) cAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGc   <  1:734607/52‑1 (MQ=255) |                                                     CAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCA  >  W3110S.gb/2317834‑2317886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑