Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3076839	3076867	29	9 [0]	[0] 28	cmtA	predicted fused mannitol‑specific enzyme IIBC component of PTS

AAAGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGCCC  >  W3110S.gb/3076868‑3076928 |                                                             aaaGAAGGTGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2620991/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGa       >  1:2676183/1‑56 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGccc  >  1:1323752/1‑61 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2516773/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:960060/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:853763/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:572994/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:464922/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2926238/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2869597/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2701420/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2685472/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2683832/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2661035/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2568416/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:116891/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2411216/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2402356/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2359513/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2047165/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:2029645/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:1910584/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:1880780/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:1787806/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:1702867/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:1634943/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:1502641/1‑59 (MQ=255) aaaGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGc    >  1:126181/1‑59 (MQ=255) |                                                             AAAGAAGATGGATTTACCGTTAACCGAAGCCTGTTGCATTCCCAGCGGATAATAGACGCCC  >  W3110S.gb/3076868‑3076928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑