Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3098097	3098120	24	2 [0]	[0] 29	yggM	conserved hypothetical protein

TGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCAA  >  W3110S.gb/3098121‑3098182 |                                                              tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:2154619/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:986696/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:914062/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:835521/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:805938/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:632266/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:623765/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:494648/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:301788/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:29283/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:288755/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:2764664/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:2700947/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:2657867/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:2203796/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1104688/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:2049291/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1693164/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1685878/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1635023/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1629392/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:154855/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1486525/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1455537/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1387058/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1350559/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1333137/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:1222199/62‑1 (MQ=255) tGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCaa  <  1:120445/62‑1 (MQ=255) |                                                              TGATCTTTTAAGATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATTACCAGTCATCAA  >  W3110S.gb/3098121‑3098182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑