Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3360691	3360717	27	25 [0]	[0] 10	gltD/gltF	glutamate synthase, 4Fe‑4S protein, small subunit/periplasmic protein

TTCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCAA  >  W3110S.gb/3360718‑3360775 |                                                          ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATGTAAAAAACCaa  >  1:2238154/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCaa  >  1:1500499/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCaa  >  1:2214975/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCaa  >  1:2638465/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCaa  >  1:2811142/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCaa  >  1:2811427/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCaa  >  1:304474/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCaa  >  1:471306/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCaa  >  1:734923/1‑58 (MQ=255) ttCATTCCATGTAAATTGTCTCGATAGTAATATACAAAATATGAATATAAAAAACCaa  >  1:784565/1‑58 (MQ=255) |                                                          TTCATTCCATGTAAATTGTCTCGATATTAATATACAAAATATGAATATAAAAAACCAA  >  W3110S.gb/3360718‑3360775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑