Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3433230	3433290	61	19 [0]	[0] 22	zraR	fused DNA‑binding response regulator in two‑component regulatory system with ZraS

AAAGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATC  >  W3110S.gb/3433291‑3433352 |                                                              aaaGCCTGCAAAATAGTGCAGTTGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:310400/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTTATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:1200884/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATGCACCACCAGAATATCGATATTATc  <  1:2346182/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:2382800/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:790974/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:692294/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:520594/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:434919/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:1459809/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:310234/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:2697670/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:2547140/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:2508239/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:1701680/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:1139072/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:2302252/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:2286831/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:217082/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:1994121/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:1856908/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:1794141/62‑1 (MQ=255) aaaGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATc  <  1:175928/62‑1 (MQ=255) |                                                              AAAGCCTGCAAAATAGTGCAGTGGCTAATGTCATCATCCACCACCAGAATATCGATATTATC  >  W3110S.gb/3433291‑3433352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑