Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3496307	3496327	21	15 [1]	[0] 8	ptsA	fused predicted PTS enzymes Hpr component, enzyme I component, and enzyme IIA component

GCTGCCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCCGG  >  W3110S.gb/3496328‑3496389 |                                                              gctgcCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCcgg  <  1:109600/62‑1 (MQ=255) gctgcCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCcgg  <  1:1600156/62‑1 (MQ=255) gctgcCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCcgg  <  1:1917148/62‑1 (MQ=255) gctgcCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCcgg  <  1:2509052/62‑1 (MQ=255) gctgcCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCcgg  <  1:274123/62‑1 (MQ=255) gctgcCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCcgg  <  1:377045/62‑1 (MQ=255) gctgcCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCcgg  <  1:688124/62‑1 (MQ=255) gctgcCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCcgg  <  1:886888/62‑1 (MQ=255) |                                                              GCTGCCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCCGG  >  W3110S.gb/3496328‑3496389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑