Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4001194	4001302	109	16 [0]	[0] 19	[pitA]	[pitA]

CAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAGG  >  W3110S.gb/4001303‑4001349 |                                               cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:2156581/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:933013/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:928155/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:734507/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:680731/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:391341/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:2909929/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:2749630/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:2694204/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:2200876/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:1099209/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:2042946/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:1961735/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:1956676/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:18961/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:178208/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:1726771/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:1483808/47‑1 (MQ=255) cAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAgg  <  1:1468585/47‑1 (MQ=255) |                                               CAGCCCGCCGGAAAGCAGTACCGCAGCCGGAAGGGTAAACACCCAGG  >  W3110S.gb/4001303‑4001349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑