Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4117049	4117051	3	18 [0]	[0] 16	mrcA	fused penicillin‑binding protein 1a murein transglycosylase and murein transpeptidase

TGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGA  >  W3110S.gb/4117052‑4117111 |                                                            tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTcagca                       >  1:1791299/1‑39 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATcgcg   >  1:309753/1‑59 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:1038095/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:105242/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:1557750/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:1610706/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:1889831/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:1949377/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:2151572/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:2352999/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:2558791/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:265547/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:2671429/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:2690257/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:607961/1‑60 (MQ=255) tGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGa  >  1:870130/1‑60 (MQ=255) |                                                            TGTTCAGATAAAGCTCGAGGATCTCGTCTTTCGTCAGCAGCTGTTCAATGCGAATCGCGA  >  W3110S.gb/4117052‑4117111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑