Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4449874	4449899	26	40 [1]	[0] 9	ytfN	conserved hypothetical protein

GCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTC  >  W3110S.gb/4449900‑4449960 |                                                             gCAGTATCAGGCGGATTATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctc  >  1:1956722/1‑61 (MQ=255) gCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctc  >  1:1164274/1‑61 (MQ=255) gCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctc  >  1:1413452/1‑61 (MQ=255) gCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctc  >  1:1631169/1‑61 (MQ=255) gCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctc  >  1:1868509/1‑61 (MQ=255) gCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctc  >  1:2535419/1‑61 (MQ=255) gCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctc  >  1:2626878/1‑61 (MQ=255) gCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGctc  >  1:354273/1‑61 (MQ=255) gCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGc    >  1:2151079/1‑59 (MQ=255) |                                                             GCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTC  >  W3110S.gb/4449900‑4449960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑