Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4450880	4450989	110	3 [1]	[0] 8	ytfN	conserved hypothetical protein

CGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTT  >  W3110S.gb/4450990‑4451051 |                                                              cGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATc    >  1:1904682/1‑60 (MQ=255) cGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCtt  >  1:1947764/1‑62 (MQ=255) cGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCtt  >  1:2403690/1‑62 (MQ=255) cGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCtt  >  1:2607479/1‑62 (MQ=255) cGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCtt  >  1:439616/1‑62 (MQ=255) cGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCtt  >  1:701469/1‑62 (MQ=255) cGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCtt  >  1:857157/1‑62 (MQ=255) cGCTTCGACCTCGCCATGCCGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCtt  >  1:2180551/1‑62 (MQ=255) |                                                              CGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTT  >  W3110S.gb/4450990‑4451051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑