Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4579909	4579943	35	11 [0]	[0] 19	yjiV	ECK4334:JW5954:b4486; conserved hypothetical protein

GCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAC  >  W3110S.gb/4579944‑4580004 |                                                             gCTTGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:2776587/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCATGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:290282/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATGATTACGTTCGCgag        >  1:2612015/1‑55 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCgag        >  1:815781/1‑55 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:83744/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:1264760/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:7996/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:733344/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:63458/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:2886277/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:2713741/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:2587498/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:2097137/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:1908570/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:1776404/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:1670771/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:158197/1‑61 (MQ=255) gCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAc  >  1:1479074/1‑61 (MQ=255) gCTGGATGACTGGCGCGATATTCTCAAGGTTACGTTGGATCAATACGTTCCCGAGAGCaaa  >  1:1422793/1‑60 (MQ=255) |                                                             GCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAAC  >  W3110S.gb/4579944‑4580004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑