Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	249051	249099	49	10 [0]	[1] 21	fhiA	ECK0230:JW5811:b0229; flagellar system protein, promoterless fragment

GGTGACCGGCATCCCGTACGCCGGGTCGTTCCCCTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAAT  >  W3110S.gb/249063‑249161                                      |                                                              ggTGACCGGCATCCCGTACGCCGGGTCGTTCCCCTGCACGCCGTCAATCTCGCCGTAGGtt                                        <  1:738780/61‑1 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGaa   >  1:1790965/1‑61 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:239953/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:779396/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:715460/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:639929/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:635489/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:536243/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:527288/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:2861969/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:2503426/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:24317/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:1100908/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:237653/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:2073562/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:2033087/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:1801789/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:1780828/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:1542658/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:1444611/1‑62 (MQ=255)                                      aCGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAat  >  1:1299553/1‑62 (MQ=255)                                      |                                                              GGTGACCGGCATCCCGTACGCCGGGTCGTTCCCCTGCACGCCGTCAATCTCGCCGTAGGTTTCGCTGGAGGGCAGGGCCATCAGTTTATCCGCCGGAAT  >  W3110S.gb/249063‑249161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑