Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	295350	295356	7	49 [0]	[0] 16	intF	predicted phage integrase

ATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAG  >  W3110S.gb/295357‑295417 |                                                             aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCATTTTCTTCACGCCGAGCACCAGTGAg  >  1:440799/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:1247941/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:1364349/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:1409349/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:1548591/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:1900936/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:2233725/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:2423223/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:2508151/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:2511375/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:2609891/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:2631088/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:2757990/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:2764584/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:327700/1‑61 (MQ=255) aTTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAg  >  1:356363/1‑61 (MQ=255) |                                                             ATTTGAAATCTACGTCTGACCAGCGAAGCGACGCAATTTCTTCACGCCGAGCACCAGTGAG  >  W3110S.gb/295357‑295417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑