Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 558612 558625 14 9 [0] [0] 12 sfmC pilin chaperone, periplasmic

CAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCG  >  W3110S.gb/558626‑558680
|                                                      
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:1112827/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:1378315/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:1568677/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:1924790/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:2109244/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:232252/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:2843854/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:298629/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:613990/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:629032/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:934405/55‑1 (MQ=255)
caattACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCg  <  1:967938/55‑1 (MQ=255)
|                                                      
CAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCG  >  W3110S.gb/558626‑558680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: