Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	565090	565165	76	17 [0]	[0] 18	intD	predicted integrase

GGCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCACC  >  W3110S.gb/565166‑565227 |                                                              ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1923563/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:594274/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:524331/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:523636/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:2783752/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:2254934/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:2208767/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:2173404/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:2169822/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1402068/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1740282/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1730643/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1594935/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1567092/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1530666/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1472535/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1432766/62‑1 (MQ=255) ggCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCAcc  <  1:1405501/62‑1 (MQ=255) |                                                              GGCATACCATATTTCATTTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCACC  >  W3110S.gb/565166‑565227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑