Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1131514	1131593	80	18 [0]	[0] 11	flgM	anti‑sigma factor for FliA (sigma 28)

TGGTGGAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTCGCGC  >  W3110S.gb/1131594‑1131655 |                                                              tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGttt       >  1:1444852/1‑57 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcgc  >  1:1054967/1‑62 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcgc  >  1:1769484/1‑62 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcgc  >  1:214734/1‑62 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcgc  >  1:2267944/1‑62 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcgc  >  1:227613/1‑62 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcgc  >  1:2540261/1‑62 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcgc  >  1:522597/1‑62 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcgc  >  1:906245/1‑62 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcg   >  1:473629/1‑61 (MQ=255) tggtggAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTcgcg   >  1:551031/1‑61 (MQ=255) |                                                              TGGTGGAGGCGGTTGTTTTTGCCGCCCGGCTGTTCGTTACCGGCGCGTCAGTGGTTTCGCGC  >  W3110S.gb/1131594‑1131655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑