Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1142189	1142239	51	19 [0]	[0] 13	flgL	flagellar hook‑filament junction protein

CTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATAA  >  W3110S.gb/1142240‑1142301 |                                                              cTGAAAACGCCGGTCGCGGATAGCGATGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:2353376/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGATGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:2356728/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:1467306/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:1833439/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:199186/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:2357088/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:2636518/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:2739753/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:2788480/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:2874093/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:290013/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:810835/1‑62 (MQ=255) cTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATaa  >  1:974548/1‑62 (MQ=255) |                                                              CTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATAA  >  W3110S.gb/1142240‑1142301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑