Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1164120	1164125	6	27 [0]	[0] 27	ycfL	hypothetical protein

ACATTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACTTT  >  W3110S.gb/1164126‑1164187 |                                                              acaTTCGGCTGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:2748583/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCATAAAGTCAGACttt  <  1:627899/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:2278141/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:986826/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:837863/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:813411/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:782/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:61954/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:559019/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:517930/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:425511/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:2712188/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:2407026/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:2375125/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1073049/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:21293/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1992492/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1800743/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1716058/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:170395/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1483382/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1392774/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1357809/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1298187/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1284503/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1250093/62‑1 (MQ=255) acaTTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACttt  <  1:1185147/62‑1 (MQ=255) |                                                              ACATTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACTTT  >  W3110S.gb/1164126‑1164187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑