Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1172284	1172411	128	3 [0]	[0] 42	mfd	transcription‑repair coupling factor

CTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGA  >  W3110S.gb/1172412‑1172473 |                                                              cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGGAATACGTTTGTAGAACGACAGa  >  1:2793400/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAg   >  1:1276657/1‑61 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAg   >  1:2792687/1‑61 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2831417/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2265091/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2352242/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2491331/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2494026/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2497424/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2591436/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2694626/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2702280/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2262137/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:310771/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:514798/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:596611/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:656965/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:704724/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:735156/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:753173/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:762346/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:87391/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1694475/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1080231/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1089659/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1108586/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1138425/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1260329/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1290743/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1305529/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1385492/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1465180/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1041992/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1719531/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1774866/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1842417/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:1945438/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2056296/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2132369/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2133376/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2137894/1‑62 (MQ=255) cTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGa  >  1:2197262/1‑62 (MQ=255) |                                                              CTTTGATCTCTTCCAGTTCGTTTTCCGTTTTGGCGCTGGCAATACGTTTGTAGAACGACAGA  >  W3110S.gb/1172412‑1172473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑