Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1189356	1189367	12	4 [0]	[0] 34	ycfD	conserved hypothetical protein

CATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACACGT  >  W3110S.gb/1189368‑1189429 |                                                              cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTcc                         >  1:1040887/1‑39 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:590976/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2451776/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2644345/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2649287/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2808852/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2922958/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:356935/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:360446/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2441134/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:606069/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:65658/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:659899/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:722593/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:800516/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:840960/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:961295/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1538677/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1055592/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:11935/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1208090/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1298685/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1311886/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1494186/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1526216/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2428086/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1627297/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1736323/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1821482/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:1859128/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2043760/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2236725/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcgt  >  1:2272544/1‑62 (MQ=255) cATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACAcg   >  1:90441/1‑61 (MQ=255) |                                                              CATTTGCAGCTTTTCGCCCACTCGCCAGCGACGACGTCCGGTACCCTGAATGATAAACACGT  >  W3110S.gb/1189368‑1189429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑