Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1191159	1191167	9	16 [0]	[0] 14	phoQ	sensory histidine kinase in two‑compoent regulatory system with PhoP

AAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTG  >  W3110S.gb/1191168‑1191228 |                                                             aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:1265999/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:1683311/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:1950223/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:2005397/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:2040746/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:2316351/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:2397883/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:2536235/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:2629654/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:2913758/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:490974/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:513704/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:913268/61‑1 (MQ=255) aaGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTg  <  1:953913/61‑1 (MQ=255) |                                                             AAGGGTATAGAACAGATTGCTCTCGCCACGTAACAGCCGAAACGTAGTTTTATCGAAACTG  >  W3110S.gb/1191168‑1191228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑