| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 1,442,561 | T→G | intergenic (‑63/‑211) | ydbK ← / → ydbJ | fused predicted Fe‑S subunit of pyruvate‑flavodoxin oxidoreductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 1,442,561 | 0 | T | G | 81.4% | 187.6 / 24.6 | 70 | intergenic (‑63/‑211) | ydbK/ydbJ | fused predicted Fe‑S subunit of pyruvate‑flavodoxin oxidoreductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/13); new base G (0/57); total (0/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
ATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATC > W3110S.gb/1442512‑1442616 | aTTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:1133160/60‑1 (MQ=255)aTTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:2735494/60‑1 (MQ=255)aTTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:2738876/60‑1 (MQ=255)aTTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:2656623/60‑1 (MQ=255)aTTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:2367014/60‑1 (MQ=255)aTTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:1910656/60‑1 (MQ=255)aTTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:396472/60‑1 (MQ=255)aTTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:2061847/60‑1 (MQ=255) ttGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTa < 1:1718469/59‑1 (MQ=255) tgctgcGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCtt < 1:622063/62‑1 (MQ=255) tgctgcGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCtt < 1:28166/62‑1 (MQ=255) tgctgcGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCtt < 1:1529047/62‑1 (MQ=255) tgctgcGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCtt < 1:1582185/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCTTTTTCGCTTTTGTGTCCCCCACATc < 1:2345855/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2326377/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2344271/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2223466/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2349124/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2209676/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2208226/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2089824/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2188273/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2718759/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2801044/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2813643/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2855051/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2860849/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2893823/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:314310/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:485059/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:592879/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:655427/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:735610/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:859956/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:902157/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:938524/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1269253/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1362653/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:137999/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1438142/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1454883/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1458336/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1483690/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1496614/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1540752/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1559684/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1596080/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1263994/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1222783/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1756757/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1812033/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1920152/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1933573/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2018035/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2034538/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2040026/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2046043/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2086538/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2095854/62‑1 (MQ=255) gtaATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGCCCCCCACATc < 1:2802178/62‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:984859/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1294326/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1339733/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1364806/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:584261/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1487079/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1657679/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:169748/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:2705872/61‑1 (MQ=255) taATCGTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATc < 1:1031516/61‑1 (MQ=255) | ATTGCGCAAATGAGGGGCGCACGAAATTGCTGCGCGCCCAGTAGTAATCTTTCAATTTTAGCAAATGGCTTTCTTCTGCATTTTCGCTTTTGTGTCCCCCACATC > W3110S.gb/1442512‑1442616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |