| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 2,196,743 | G→A | L254L (CTG→TTG) | mrp ← | antiporter inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,196,743 | 0 | G | A | 87.5% | 325.0 / 29.9 | 128 | L254L (CTG→TTG) | mrp | antiporter inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (16/0); new base A (0/112); total (16/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.07e-20 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
ACCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTCC > W3110S.gb/2196691‑2196753 | aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGt > 1:730303/1‑61 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:3022/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:2908588/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:416302/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:2099832/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:1419593/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:690674/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:2694705/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:2359962/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:2535170/1‑62 (MQ=255)aCCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTc > 1:1099355/1‑62 (MQ=255) aCATGACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2746576/41‑1 (MQ=38) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2815817/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:418716/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2414603/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2900368/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:288538/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2880423/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2878672/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2861932/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2833991/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2415957/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:264057/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2512102/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2813589/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:27989/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2763467/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2749080/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2547962/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:739070/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1023208/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:904167/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:890996/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:822448/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:816699/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:815800/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:813750/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:762021/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:754808/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:750482/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:386117/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:738073/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:728696/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:682571/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:672411/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:647699/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:644970/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:616547/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:609812/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:457636/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:954467/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1353538/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1674906/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1656381/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:163536/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1613811/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1589809/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1467422/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1465360/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1461028/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1461007/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1385250/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1384369/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1023478/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1335078/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1273973/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1265075/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1220932/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1207615/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1192832/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1166597/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1152383/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1129101/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:107873/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1061236/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2162845/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2382516/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:23347/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2331703/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2328853/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:227947/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2254894/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2215864/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2187135/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2183684/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2145093/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2139624/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2119858/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2031363/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2011467/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1987920/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1905791/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1891917/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1836680/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1832511/41‑1 (MQ=255) aCATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1729001/41‑1 (MQ=255) aCATCACAATGCCTTTTATCGCATCGATCAACGCGATGTcc < 1:2549347/41‑1 (MQ=38) cATCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:270947/40‑1 (MQ=255) aTCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:2338661/39‑1 (MQ=255) tCACAATGCCTTTTTTCGCATCGATCAACGCGATGTcc < 1:1681532/38‑1 (MQ=255) | ACCGGAACCTCGACTTTCTCGAACATCACAATGCCTTTTTTCGCATCGATCAGCGCGATGTCC > W3110S.gb/2196691‑2196753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |