| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 2,918,128 | A→G | G425G (GGT→GGC) | gudX ← | predicted glucarate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,918,128 | 0 | A | G | 81.0% | 271.0 / 52.0 | 126 | G425G (GGT→GGC) | gudX | predicted glucarate dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (0/24); new base G (0/102); total (0/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
GGACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGCAGACGTTTATAGGCCTCATG > W3110S.gb/2918081‑2918175 | ggATGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1113018/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTTCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1194059/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCTGGCCTGCGTCGTTAcg < 1:748607/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGTGCCTGCGTCGTTAcg < 1:629588/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2222725/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2456547/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2426088/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2411458/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2359684/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2358919/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:590910/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:618631/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2302236/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2602273/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2154635/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2147598/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:639412/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2119509/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2084440/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2056598/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2054522/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:340645/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:453634/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:459657/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:420305/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:536158/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:392062/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:389331/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:545658/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:377932/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:346962/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2469220/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2888953/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:565764/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2828111/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2822961/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2771805/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:587601/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2679051/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:660305/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:86786/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1602002/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1592506/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:156474/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:802733/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:836284/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:857213/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1449604/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1413566/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:778507/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1355714/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1282969/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1245157/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:112812/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1107940/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1090454/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:942220/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1026648/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1668938/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1992261/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:668068/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:194797/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:685481/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1929046/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1920563/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1915424/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:188714/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1885130/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1870788/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:740230/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1791082/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1767729/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1747930/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1671395/62‑1 (MQ=255)ggACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2030759/62‑1 (MQ=255)gaaCGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:99142/60‑1 (MQ=255) gACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:446228/61‑1 (MQ=255) gACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1001226/61‑1 (MQ=255) gACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:1459447/61‑1 (MQ=255) gACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2763861/61‑1 (MQ=255) gACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGGCCTGCGTCGTTAcg < 1:2144121/61‑1 (MQ=255) tACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTAc < 1:409648/54‑1 (MQ=255) tACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTAc < 1:1540755/54‑1 (MQ=255) tACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTAc < 1:170616/54‑1 (MQ=255) tACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTAc < 1:537914/54‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:2355804/62‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:2258856/62‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:2357672/62‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:2009636/62‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:193087/62‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:1839357/62‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:753106/62‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:1475162/62‑1 (MQ=255) cAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:1063062/62‑1 (MQ=255) aaaGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGc < 1:1954498/61‑1 (MQ=255) aGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGCAGACGTTTATAGGCCTCAtg < 1:570328/62‑1 (MQ=255) aGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGCAGACGTTTATAGGCCTCAtg < 1:1652643/62‑1 (MQ=255) aGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGCAGACGTTTATAGGCCTCAtg < 1:2838993/62‑1 (MQ=255) aGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGCAGACGTTTATAGGCCTCAtg < 1:1375612/62‑1 (MQ=255) tACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGCAGACGTTTATAGGCCTCAtg < 1:383888/59‑1 (MQ=255) | GGACGTTTACGGTCAAAGGTCCAGCCGGGGATCAGGTACTGCATCGGACCTGCGTCGTTACGCGCACCGCCAGGCAGACGTTTATAGGCCTCATG > W3110S.gb/2918081‑2918175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |