| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 547,694 | A→G | pseudogene (114/261 nt) pseudogene (114/1259 nt) |
ylbE → ylbE → |
ECK0512:JW0507:b4507; hypothetical protein, N‑ter fragment ECK0512:JW0508+JW0507:b4572; hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 547,694 | 0 | A | G | 100.0% | 154.5 / NA | 46 | pseudogene (114/261 nt) pseudogene (114/1259 nt) | ylbE ylbE | ECK0512:JW0507:b4507; hypothetical protein, N‑ter fragment ECK0512:JW0508+JW0507:b4572; hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (41/5); total (41/5) | |||||||||||
CCACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAAGGCAAAACACTGCTTCACGCCGGGCCGCC > W3110S.gb/547641‑547723 | ccACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAGGGCAAAac < 1:850471/62‑1 (MQ=255)ccACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAGGGCAAAac < 1:2361000/62‑1 (MQ=255)ccACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAGGGCAAAac < 1:2174392/62‑1 (MQ=255)ccACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAGGGCAAAac < 1:282582/62‑1 (MQ=255)ccACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAGGGCAAAac < 1:621395/62‑1 (MQ=255) cGAGCTAAACGAGGGCAAAACACTGCTTCACGCCGGgcc > 1:2639187/1‑39 (MQ=37) cGAACTAAACGAGGGCAAAACCCTGCTTCACGCCGGgccgcc > 1:1461872/1‑42 (MQ=25) cGAACTAAACGAGGGCAAAACACTGCTTCCCGCCGGgccgcc > 1:536969/1‑42 (MQ=38) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2827943/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2322922/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2446207/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:246527/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2621411/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:830846/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2662490/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2821024/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:704665/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:678421/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2887699/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:42225/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:433407/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:515556/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:581923/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:58195/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:616123/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2267966/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1082443/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1158148/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1167891/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1204824/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1245413/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1418660/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1438213/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1465482/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1528817/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:16519/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1769535/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1828214/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1956074/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1958132/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2031225/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2212975/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:2252628/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgcc > 1:1055763/1‑42 (MQ=255) cGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGgccgc > 1:1664626/1‑41 (MQ=255) cGAACAAAACGAGGGCAAAACACTGCTTCACGCCgg > 1:214968/1‑36 (MQ=37) | CCACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAAGGCAAAACACTGCTTCACGCCGGGCCGCC > W3110S.gb/547641‑547723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |