Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 797,264 | C→T | L97L (CTG→TTG) | modC → | molybdate transporter subunit |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 797,264 | 0 | C | T | 87.2% | 215.4 / 19.6 | 86 | L97L (CTG→TTG) | modC | molybdate transporter subunit |
Reads supporting (aligned to +/- strand): ref base C (11/0); new base T (0/75); total (11/75) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.09e-14 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATTACAAAGTGCGTGGCAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCT > W3110S.gb/797244‑797319 | aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATTGTCAATCAGTTCGAt < 1:2129224/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCgtt < 1:858727/62‑3 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:31168/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1971782/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:292589/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2912620/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2736652/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2619021/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2582718/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2565101/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2548719/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2460608/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2365856/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2304937/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2276126/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:207120/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:20073/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1993096/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1979289/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1052152/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:576675/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:851370/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:810398/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:776733/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:763365/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:7156/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:690557/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:688357/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:627587/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:5853/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:338621/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:496671/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:487388/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:464060/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:446601/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:432600/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:407533/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:405137/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:370517/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1316502/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1592380/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1520352/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:149568/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1470831/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:145132/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1387552/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1379309/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1353688/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1344638/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:134366/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1931636/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1315371/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1282095/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1253692/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1232506/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1209175/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1139700/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1118772/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1097877/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1036596/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1611936/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1605322/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:193234/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1929223/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1919857/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1647439/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1877894/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1722123/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1817284/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1782320/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1815864/62‑1 (MQ=255) aTTATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:179744/62‑1 (MQ=255) ttATAAAGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1727590/61‑1 (MQ=255) taaaGTGCGTGGCAATTTGCGCTACGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:2399985/57‑1 (MQ=255) tGGCAATTTGCGCTAGGGCATGGCGAAAAGCATGGTCAATCAGTTCGAt < 1:1634463/49‑1 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATa > 1:929393/1‑47 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGgcgc > 1:2642211/1‑59 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:2320673/1‑60 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:1794702/1‑60 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:2581478/1‑60 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:1876357/1‑60 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:1391222/1‑60 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:850745/1‑60 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:369771/1‑60 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:363018/1‑60 (MQ=255) cAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCt > 1:283504/1‑60 (MQ=255) | ATTACAAAGTGCGTGGCAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCT > W3110S.gb/797244‑797319 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |