| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 1,030,578 | 2 bp→AC | coding (93‑94/279 nt) | yccX → | predicted acylphosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 1,030,578 | 0 | T | A | 86.1% | 116.1 / 5.2 | 43 | G31G (GGT→GGA) | yccX | predicted acylphosphatase |
| Reads supporting (aligned to +/- strand): ref base T (0/6); new base A (0/37); total (0/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | W3110S.gb | 1,030,579 | 0 | T | C | 86.1% | 103.5 / 7.9 | 43 | L32L (TTA→CTA) | yccX | predicted acylphosphatase |
| Reads supporting (aligned to +/- strand): ref base T (0/6); new base C (0/37); total (0/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCTTGCG > W3110S.gb/1030537‑1030633 || ggATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCaaaaa < 1:1037539/62‑1 (MQ=255)ggATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCaaaaa < 1:2204525/62‑1 (MQ=255)ggATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCaaaaa < 1:2830012/62‑1 (MQ=255)ggATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCaaaaa < 1:316242/62‑1 (MQ=255)ggATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCaaaaa < 1:384998/62‑1 (MQ=255)ggATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCaaaaa < 1:812608/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2813776/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2376187/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2453148/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:875584/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2457185/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2480185/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2534812/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2543124/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2578003/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:751393/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1003779/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:297411/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:84603/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:468806/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:542204/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:659056/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:725780/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2343724/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1152937/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1159283/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1363348/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1473703/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1517720/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1552107/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1585650/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1905620/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2016205/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2053923/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2130164/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2133533/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2135281/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2152235/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2161739/62‑1 (MQ=255) aCTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:2362141/62‑1 (MQ=255) aCTGGGACTAACCGGGTACACCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:167299/62‑1 (MQ=255) aCTGGGACTAACCGGGGACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:185429/62‑1 (MQ=255) cTGGGACTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCCTGCg < 1:1814548/61‑1 (MQ=255) || GGATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCTTGCG > W3110S.gb/1030537‑1030633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |