| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 1,313,120 | Δ3 bp | coding (318‑320/720 nt) | tonB → | membrane spanning protein in TonB‑ExbB‑ExbD complex |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 1,313,120 | 0 | A | . | 100.0% | 392.4 / NA | 93 | coding (318/720 nt) | tonB | membrane spanning protein in TonB‑ExbB‑ExbD complex |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (0/93); total (0/93) | |||||||||||
| * | W3110S.gb | 1,313,121 | 0 | C | . | 100.0% | 392.4 / NA | 93 | coding (319/720 nt) | tonB | membrane spanning protein in TonB‑ExbB‑ExbD complex |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (0/93); total (0/93) | |||||||||||
| * | W3110S.gb | 1,313,122 | 0 | A | . | 100.0% | 392.4 / NA | 93 | coding (320/720 nt) | tonB | membrane spanning protein in TonB‑ExbB‑ExbD complex |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (0/93); total (0/93) | |||||||||||
CCGAAACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGTACAGGAGCAGCCAAAACGCGATGTCAA > W3110S.gb/1313082‑1313146 ||| ccgaaACCTAAGCCAAAACCGAAGCCTGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1169399/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCTATGTcca < 1:1502455/62‑3 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:321757/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:471589/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:441504/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:429862/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:415068/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:403090/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:396593/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:389611/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:382282/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:340533/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:322860/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:483657/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:319955/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:314809/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:313357/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:31217/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:294569/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:294568/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:280087/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:272907/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:238068/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1005977/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:757423/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:986210/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:977462/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:932361/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:899087/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:848598/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:83472/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:811179/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:804130/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:781099/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:767693/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:2335/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:715613/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:700229/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:671264/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:66570/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:66216/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:641852/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:569957/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:565457/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:485901/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:484475/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1261541/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1441210/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1438447/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1393463/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1385032/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:137482/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1372733/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1372325/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1345322/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1308387/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:211699/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1239239/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:116020/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1159010/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1147601/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1124271/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1098485/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1044106/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1041334/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1026298/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:145216/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:208051/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:178309/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1651989/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1647788/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1642671/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1639830/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:210811/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:158334/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1558595/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:222173/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1551551/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1518108/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1517641/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1457770/62‑1 (MQ=255)ccgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:145486/62‑1 (MQ=255)ccgaaACCTAAGCCAAAAACGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:410234/62‑1 (MQ=255) cgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1277937/61‑1 (MQ=255) cgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1198070/61‑1 (MQ=255) cgaaACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:92032/61‑1 (MQ=255) aGCCAAAACCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:902878/52‑1 (MQ=37) gCCAAAACCGAAGCCGTTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:178805/51‑1 (MQ=255) ccAAAACAGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1178066/50‑1 (MQ=25) aaaCCGAAGCCGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1426856/47‑1 (MQ=37) ccGGTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:466240/38‑1 (MQ=25) ggTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1621351/36‑1 (MQ=21) ggTGAAAAAGGT‑‑‑GGAGCAGCCAAAACGCGATGTCaa < 1:1359033/36‑1 (MQ=21) ||| CCGAAACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGTACAGGAGCAGCCAAAACGCGATGTCAA > W3110S.gb/1313082‑1313146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |