| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 3,824,697 | Δ3 bp | coding (49‑51/642 nt) | pyrE → | orotate phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 3,824,696 | 0 | G | . | 100.0% | 220.4 / NA | 52 | coding (48/642 nt) | pyrE | orotate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (52/0); total (52/0) | |||||||||||
| * | W3110S.gb | 3,824,697 | 0 | G | . | 100.0% | 220.4 / NA | 52 | coding (49/642 nt) | pyrE | orotate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (52/0); total (52/0) | |||||||||||
| * | W3110S.gb | 3,824,698 | 0 | T | . | 100.0% | 220.4 / NA | 52 | coding (50/642 nt) | pyrE | orotate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (52/0); total (52/0) | |||||||||||
GTTTATTGAATTTGCGCTTAGCAAGCAGGTGTTAAAGTTTGGCGAGTTTACGCTGAAATCCGGG > W3110S.gb/3824669‑3824732 ||| gTTTATTGAATTTGCGCTTAGCAGGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1584052/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGtt > 1:439594/1‑45 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:403109/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1044511/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1434897/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1435645/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1474693/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1483155/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1628317/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:30342/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:312351/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:361892/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:364625/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:380566/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1433033/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:46360/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:467759/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:484195/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:492814/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:553471/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:559694/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:58963/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:723945/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:759497/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:813380/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:991461/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1208188/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1062607/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1062930/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1099551/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1120899/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1129344/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1130488/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:11494/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1156401/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1173772/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1176990/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1178050/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1418395/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1218040/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1224812/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1253936/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1262281/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1294779/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1334265/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1334791/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1362267/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1404051/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCggg > 1:1415889/1‑61 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCgg > 1:1329958/1‑60 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCCg > 1:1175409/1‑59 (MQ=255)gTTTATTGAATTTGCGCTTAGCAAGCA‑‑‑GTTAAAGTTTGGCGAGTTTACGCTGAAATCAggg > 1:279192/1‑61 (MQ=255) ||| GTTTATTGAATTTGCGCTTAGCAAGCAGGTGTTAAAGTTTGGCGAGTTTACGCTGAAATCCGGG > W3110S.gb/3824669‑3824732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |