Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3227012	3227139	128	58 [3]	[0] 50	ygjJ	conserved hypothetical protein

CCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGA  >  W3110S.gb/3226950‑3227029                                                              |                   cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:672967/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1010528/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:407283/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:412616/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:442249/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:456966/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:485281/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:532667/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:54693/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:580593/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:609482/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:65341/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:658607/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:662114/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:352228/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:791643/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:804706/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:816116/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:854810/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:866411/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:900116/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:909957/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:911004/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:924540/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:971465/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:981329/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:995698/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:996026/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1417283/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1015133/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1016797/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1054995/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1084422/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1198624/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1264513/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1316865/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:132509/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1328414/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1328641/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:138665/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1407604/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:325593/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1417662/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1424219/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1444094/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1445073/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1520254/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1523168/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:1543857/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:182528/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:189560/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:206944/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:243187/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTc                    >  1:309090/1‑62 (MQ=255) cccGCGACATTATGACTGCGCTGAAGGTACAGAACATAAGCGGCAACTTTCGTTATAGCGTc                    >  1:595097/1‑62 (MQ=255)                   cgcTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGa  >  1:753337/1‑62 (MQ=255)                   cgcTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGa  >  1:1336544/1‑62 (MQ=255)                   cgcTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGa  >  1:323945/1‑62 (MQ=255)                                                              |                   CCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGA  >  W3110S.gb/3226950‑3227029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑