Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3242278	3242561	284	94 [0]	[0] 95	uxaC	uronate isomerase

CATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTT  >  W3110S.gb/3242216‑3242277                                                              | cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAAGCACCAGCCGGAACCGAACTGCAttt  <  1:939726/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAAGCACCAGCCGGAACCGAACTGCAttt  <  1:614383/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:579503/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:704917/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:678045/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:676049/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:647545/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:646049/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:644947/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:633967/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:630515/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:613719/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:583981/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:710949/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:57270/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:570271/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:555273/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:527165/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:480130/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:466709/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:458686/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:440562/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:368489/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1014701/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:802664/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:999939/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:975436/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:963271/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:906140/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:887015/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:871389/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:867500/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:846911/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:843062/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:834500/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:822521/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:709655/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:790589/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:787826/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:773854/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:76867/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:763373/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:740125/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:7250/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:720107/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:711525/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:309014/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1239316/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1409492/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1407096/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1394570/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:138754/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1315465/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1293091/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1288142/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1277247/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1264499/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1257368/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1252453/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1431109/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1226357/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1159949/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1136701/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1125152/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1095010/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1090777/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1077491/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:107295/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1051672/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1021540/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1437681/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:274085/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:267040/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:238594/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:183920/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1648636/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1627908/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1594526/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1574087/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1547585/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1524519/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1507126/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1472509/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1464560/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1458716/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1454919/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1444808/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1437966/62‑1 (MQ=255) cATCTGACGTTCCATACCGTCTTGCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:294437/62‑1 (MQ=255)  aTCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1633673/61‑1 (MQ=255)  aTCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:504224/61‑1 (MQ=255)  aTCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:25536/61‑1 (MQ=255)                   gTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1128021/44‑1 (MQ=255)                      tttCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAttt  <  1:1584913/41‑1 (MQ=255)                                                              | CATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTT  >  W3110S.gb/3242216‑3242277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑