Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3287661	3287722	62	78 [0]	[5] 6	yraH	predicted fimbrial‑like adhesin protein

CCTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTGGG  >  W3110S.gb/3287599‑3287660                                                              | ccTAACTTCCCTGATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1281946/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGGGGCAAAAGGTGTggg  <  1:569967/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTtgg  <  1:297350/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:297599/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1003187/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:551424/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:538833/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:52732/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:206961/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:429364/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:379855/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:356537/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:217960/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:572240/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:275041/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:254992/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:247521/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:24432/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:244282/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:225368/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:801042/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:983585/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:968717/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:968147/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:965311/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:93927/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:917431/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:875671/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:860792/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:203432/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:789723/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:751575/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:690492/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:680647/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:648368/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:606395/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:605553/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:582727/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1147029/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1361104/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1359090/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:133770/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1322725/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1318173/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1314221/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1265750/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1229489/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1212558/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1594927/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1146956/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1121379/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1110032/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1102839/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1093420/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1050195/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1046452/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1036152/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1501306/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1618268/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1563333/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1546255/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:153497/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1531939/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1529028/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1527047/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1503744/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1366196/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1465731/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1441278/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1431991/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1420381/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1416691/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1399266/62‑1 (MQ=255) ccTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTACTGGCATAGCGGCAACAGGTGTggg  <  1:346206/62‑1 (MQ=255)  cTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1243027/61‑1 (MQ=255)                       aaGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:1117013/40‑1 (MQ=255)                       aaGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:557348/40‑1 (MQ=255)                          tAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTggg  <  1:23223/37‑1 (MQ=255)                                                              | CCTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTGGG  >  W3110S.gb/3287599‑3287660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑