Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3315166	3315808	643	74 [0]	[0] 50	infB	fused protein chain initiation factor 2, IF2

TACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCA  >  W3110S.gb/3315104‑3315165                                                              | tACGACCACGGCCACGGCCGCCTTCGACTTCTCGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:796586/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:533425/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:154399/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1552055/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:156406/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1604990/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:186634/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:202529/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:218077/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:313412/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:333403/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:373760/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:428655/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:432383/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:441025/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:478452/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1043227/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:567102/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:585495/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:623501/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:653074/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:718097/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:791898/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:825462/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:830378/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:914014/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:952206/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:955195/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:974351/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:984560/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1534974/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1253167/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1263245/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1265008/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1242750/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1283172/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1359959/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1419821/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1426854/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1225215/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1217571/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1436589/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1488943/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1496468/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1498946/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1207717/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1103641/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1064964/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1057480/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1013255/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1516560/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCAGGCGAGCa  <  1:1257270/62‑1 (MQ=255) tACGACCACGGCCACGGCCGCCTTAGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:716500/62‑1 (MQ=255) tACGACCACGGCCACGGACGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:739551/62‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:121206/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:920606/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1066758/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1524738/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:607293/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:126206/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:354413/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:335709/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:21492/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1505050/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1621170/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:160748/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1511638/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1600108/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1591104/61‑1 (MQ=255)  aCGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1565659/61‑1 (MQ=255)   cGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:690559/60‑1 (MQ=255)   cGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:1281521/60‑1 (MQ=255)              acggccGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCa  <  1:654209/49‑1 (MQ=255)                        tCGAGTTCTCGATCGGTTTCGTGTTCTGCCTGGCGAGCa  <  1:519208/39‑1 (MQ=25)                                                              | TACGACCACGGCCACGGCCGCCTTCGACTTCACGATCGCTTTCGTCTTCTGCCTGGCGAGCA  >  W3110S.gb/3315104‑3315165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑