Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3360228	3360354	127	52 [0]	[0] 42	gltD	glutamate synthase, 4Fe‑4S protein, small subunit

CCGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGC  >  W3110S.gb/3360166‑3360227                                                              | ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:651782/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:174023/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:218572/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:283437/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:288353/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:312988/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:33704/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:385280/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:406118/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:440750/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:445397/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:474928/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1016736/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:65258/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:6700/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:672647/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:725389/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:876096/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:897264/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:910624/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:924059/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:954973/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:969841/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:132787/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1059739/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1144757/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1180942/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1017587/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1238948/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1275501/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1303950/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1310841/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1007400/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1330217/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1345838/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1403479/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1419794/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1424099/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1447396/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1457816/62‑1 (MQ=255) ccGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACAAATCGTTCCGGc  <  1:1408801/62‑1 (MQ=255) ccGGACGCCAAAGGCCATCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1246407/62‑1 (MQ=255)  cGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:418950/61‑1 (MQ=255)  cGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1300311/61‑1 (MQ=255)  cGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:157868/61‑1 (MQ=255)  cGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGATCCGAACATATCGTTCCGGc  <  1:1151162/61‑1 (MQ=255)           aaGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1119606/52‑1 (MQ=255)                cGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:387514/47‑1 (MQ=255)                  tCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:174382/45‑1 (MQ=255)                    gccgcGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:1581191/43‑1 (MQ=255)                    gccgcGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGc  <  1:698614/43‑1 (MQ=255)                          cgGAGATCGTTGCAGGTTCCGATCATTTCGTTCCGGc  <  1:444065/37‑1 (MQ=38)                                                              | CCGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGC  >  W3110S.gb/3360166‑3360227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑