Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3434437	3434543	107	32 [0]	[0] 12	zraS	sensory histidine kinase in two‑component regulatory system with ZraR

TCTGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGT  >  W3110S.gb/3434376‑3434436                                                             | tctGGCTTTAATTTCTGCATTTCTTCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:618277/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:454264/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:989498/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:942508/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:933286/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:879215/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:791281/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:766565/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:717599/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:650277/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:564753/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:546647/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:531610/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:529046/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:501791/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1057611/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:418162/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:393643/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:309507/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:260347/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:162891/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1581425/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1572199/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1549515/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1436485/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1394897/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1274172/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1188680/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:1108514/61‑1 (MQ=255) tctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATAGGGGt  <  1:770198/61‑1 (MQ=255)  ctGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:338856/60‑1 (MQ=255)     gCTTAAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGt  <  1:113919/57‑1 (MQ=255)                                                             | TCTGGCTTTAATTTCTGCATTTCATCCGGCGAATAGAGCGCACGCCCGACCTTATCGGGGT  >  W3110S.gb/3434376‑3434436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑