Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3486313	3486416	104	57 [0]	[0] 28	[yijP]	[yijP]

CCCTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCAA  >  W3110S.gb/3486252‑3486312                                                             | cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:574558/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:210592/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:244342/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:246944/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:297834/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:298648/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:33339/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:333910/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:364097/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:386352/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:398847/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:408305/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:464576/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:507093/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:571184/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:196884/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:603011/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:670329/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:671432/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:684559/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:734620/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:772423/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:811491/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:888621/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:905983/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:915368/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:930409/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:958500/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:990251/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1320422/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1057003/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1070557/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1096130/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1119585/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1131847/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1145500/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1162743/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1164190/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1203224/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1203545/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1277308/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1279862/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1314034/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1044633/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1378957/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1389410/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1392006/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1408152/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1416776/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1473212/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1513575/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1541887/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1574878/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:1596979/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:166383/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:167702/1‑61 (MQ=255) cccTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCaa  >  1:171613/1‑61 (MQ=255)                                                             | CCCTCGTGCTTTTGCGCGAGGGTTTTCTGAAATACTTCTGTTCTAACACCCTCGTTTTCAA  >  W3110S.gb/3486252‑3486312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑