Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3516081	3516081	1	92 [0]	[0] 116	hslU	molecular chaperone and ATPase component of HslUV protease

GGCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAGG  >  W3110S.gb/3516020‑3516080                                                             | gtcGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1291123/59‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:406632/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:561120/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:534006/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:508446/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:493436/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:470597/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:459318/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:449940/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:439532/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:421084/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:412742/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:591800/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:366442/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:356246/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:345981/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:34267/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:337599/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:326780/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:249030/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:247075/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1004442/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:21148/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:846774/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:996491/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:988483/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:986721/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:981670/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:942963/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:93838/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:887461/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:886143/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:865121/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:855089/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:566582/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:839933/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:764024/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:728827/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:722533/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:709439/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:663524/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:650183/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:639092/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:596633/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:213144/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1263336/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1415245/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1390481/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1385152/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1353092/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:135211/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1350506/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1338996/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1324338/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1317136/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1277590/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1263703/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1419529/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1168973/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1163630/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1092547/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1061729/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1055186/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1035066/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1033181/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1027692/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1015609/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1014522/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1570189/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:182727/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:173910/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:169582/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1649240/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1629025/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1606334/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1603978/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1588955/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1574867/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:192344/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1553410/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1544986/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1538052/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1527091/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1499660/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1491312/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1464543/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1434281/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:1431122/61‑1 (MQ=255) ggCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGAAgg  <  1:67747/61‑1 (MQ=255)  gCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:354390/60‑1 (MQ=255)  gCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:475204/60‑1 (MQ=255)        atatCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAgg  <  1:293236/54‑1 (MQ=255)                                                             | GGCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAGG  >  W3110S.gb/3516020‑3516080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑