Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3714283	3714364	82	71 [1]	[0] 43	atpI	ATP synthase, membrane‑bound accesory subunit

GGGAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGCTTCTGCTCGTTCAGTTAC  >  W3110S.gb/3714221‑3714300                                                              |                   tggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:93907/2‑62 (MQ=255) gggAGCAGGAGTGAAAATCGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1338885/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGATACGTTGCTCGGAAGc                    >  1:838838/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:290116/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:497455/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:482665/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:454190/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:413824/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:397340/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:357443/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:355304/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:313370/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:213582/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:283201/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:282669/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:248306/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:244753/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:231422/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:218435/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:184093/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:526418/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:546016/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:553160/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:572077/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:574368/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:640308/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:663022/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:665110/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:67041/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:704458/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:706757/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:766223/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:800552/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:811791/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:825921/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:975647/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1182993/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:208172/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1331971/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1329099/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1317450/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:121779/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1217134/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1208727/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1197018/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1340875/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1168707/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1111232/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1079098/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1067868/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1061911/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1054587/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1005808/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1474995/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1001125/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:181444/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:170770/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1592592/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1557971/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1520093/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1511965/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1376350/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1445714/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1443802/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1422614/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1410630/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1408275/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1400184/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGc                    >  1:1384945/1‑62 (MQ=255) gggAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCACGGAAGc                    >  1:1191113/1‑62 (MQ=255)                   cGTGATGTCTGTGTCGCGCGTGAGTCGAAACGTTGCTCGGAAGCTTCTGCTCGTTCAGTTAc  <  1:114941/62‑1 (MQ=255)                                                              |                   GGGAGCAGGAGTGAAAAACGTGATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGCTTCTGCTCGTTCAGTTAC  >  W3110S.gb/3714221‑3714300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑