Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3833876	3834046	171	80 [0]	[0] 22	rfaG	glucosyltransferase I

CAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACA  >  W3110S.gb/3833815‑3833875                                                             | cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:383156/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:563948/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:534376/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:526758/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:494276/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:486966/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:452613/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:448252/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:431899/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:567164/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:331238/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:327963/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1000946/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:288954/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:286135/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:22410/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:167684/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:822680/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:973602/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:925280/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:887905/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:887142/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:850180/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:841487/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:834245/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:826383/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:316114/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:799273/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:776269/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:752613/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:743688/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:722961/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:674105/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:640602/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1639622/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:107535/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1119019/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1120826/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:106793/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:120930/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1249825/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1259160/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1268846/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1292703/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1320713/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1064927/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1362320/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1385673/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1406195/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1420890/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1435456/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1002475/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1559322/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1512530/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1522168/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1522796/61‑1 (MQ=255) cAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1547776/61‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:973481/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1106557/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:832429/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:236342/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:823532/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1558991/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1220243/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:763261/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:402976/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1502161/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:908764/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1324058/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:104738/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:535545/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1484940/60‑1 (MQ=255)  aaaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:51180/60‑1 (MQ=255)   aaCTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:177597/59‑1 (MQ=255)       gaacctgaacGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:622339/55‑1 (MQ=255)            tgaacGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1351840/50‑1 (MQ=255)               acGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1610968/47‑1 (MQ=255)                    ttCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:473718/42‑1 (MQ=255)                     tCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:1125206/41‑1 (MQ=255)                        aaTTCTTCCTCCCGGTATTTATCCGGACAGAAAATACa  <  1:568739/38‑1 (MQ=255)                                                             | CAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACA  >  W3110S.gb/3833815‑3833875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑