Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4114603	4115087	485	54 [0]	[0] 25	[nudE]–[mrcA]	[nudE],[mrcA]

CGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTGAAGA  >  W3110S.gb/4114541‑4114602                                                              | cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:612923/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:103129/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:243847/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:259410/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:266787/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:334710/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:376377/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:409522/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:440801/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:484600/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:542074/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:543330/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:558949/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:593507/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:228481/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:669932/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:676639/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:836874/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:837430/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:866176/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:917631/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:927081/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:963762/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:972085/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:975902/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:988820/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:997968/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1370091/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1033244/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1155780/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1163623/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1257890/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:126424/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1267337/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1267967/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1336655/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1364234/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1364621/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:192983/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1385281/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1432665/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1467962/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:152947/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1600637/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1618791/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1628365/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:168241/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:188782/62‑1 (MQ=255) cGCTAACCGCGAGCTAAAAGAAGAGGGTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1152811/62‑1 (MQ=255)  gCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1541176/61‑1 (MQ=255)  gCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1623003/61‑1 (MQ=255)  gCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:171102/61‑1 (MQ=255)       ccGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:1364567/56‑1 (MQ=255)        cgcgAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTgaaga  <  1:856346/55‑1 (MQ=255)                                                              | CGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTGAAGA  >  W3110S.gb/4114541‑4114602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑